TreeShrink: Fast and accurate detection of outlier long branches in collections of phylogenetic trees

Github page for the python code of TreeShrink.

Publication

Mai, U., Mirarab, S. TreeShrink: fast and accurate detection of outlier long branches in collections of phylogenetic trees. BMC Genomics 19, 272 (2018). https://doi.org/10.1186/s12864-018-4620-2

TreeShrink was previously published in the RECOMB-CG 2017 proceedings Mai, Uyen, and Siavash Mirarab. “TreeShrink: Efficient Detection of Outlier Tree Leaves.” In RECOMB-CG 2017, Proceedings, 116–40. 2017. doi:10.1007/978-3-319-67979-2_7.

Datasets

All data used in the journal version of TreeShrink can be found here

Contact

Uyen Mai
um6916@princeton.edu

Siavash Mirarab

smirarab@ucsd.edu