MD-Cat: Phylogenetic dating under a flexible categorical model using Expectation-Maximization

Github page for the python implementation of MD-Cat.

Publication

Mai, Uyen, Eduardo Charvel, and Siavash Mirarab. “Expectation-Maximization enables Phylogenetic Dating under a Categorical Rate Model.” bioRxiv (2022).

Datasets

Data and some related scripts used in the paper can be found here

Contact

Uyen Mai
um6916@princeton.edu

Siavash Mirarab
smirarab@ucsd.edu